Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Clk3O35492 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clk3O35492 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Gm26524-201ENSMUST00000192339 390 ntBASIC16.63■□□□□ 0.25
Clk3O35492 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Clk3O35492 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clk3O35492 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clk3O35492 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clk3O35492 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clk3O35492 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clk3O35492 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Clk3O35492 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clk3O35492 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clk3O35492 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk3O35492 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk3O35492 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.61■□□□□ 0.25
Clk3O35492 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.61■□□□□ 0.25
Clk3O35492 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk3O35492 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.61■□□□□ 0.25
Clk3O35492 Gm44549-201ENSMUST00000208351 577 ntBASIC16.61■□□□□ 0.25
Clk3O35492 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.61■□□□□ 0.25
Clk3O35492 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk3O35492 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk3O35492 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk3O35492 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.61■□□□□ 0.25
Clk3O35492 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clk3O35492 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clk3O35492 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clk3O35492 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Clk3O35492 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.6■□□□□ 0.25
Clk3O35492 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.6■□□□□ 0.25
Clk3O35492 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.6■□□□□ 0.25
Clk3O35492 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.6■□□□□ 0.25
Clk3O35492 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clk3O35492 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clk3O35492 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.6■□□□□ 0.25
Clk3O35492 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clk3O35492 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clk3O35492 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.6■□□□□ 0.25
Clk3O35492 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clk3O35492 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Clk3O35492 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.59■□□□□ 0.25
Clk3O35492 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk3O35492 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.59■□□□□ 0.25
Clk3O35492 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms