Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac1O09106 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac1O09106 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac1O09106 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.83■□□□□ 0.92
Hdac1O09106 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac1O09106 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Hdac1O09106 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.82■□□□□ 0.92
Hdac1O09106 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac1O09106 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac1O09106 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac1O09106 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac1O09106 Gm11927-201ENSMUST00000118472 759 ntBASIC20.81■□□□□ 0.92
Hdac1O09106 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.81■□□□□ 0.92
Hdac1O09106 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac1O09106 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac1O09106 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac1O09106 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hdac1O09106 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.81■□□□□ 0.92
Hdac1O09106 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.81■□□□□ 0.92
Hdac1O09106 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac1O09106 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac1O09106 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.8■□□□□ 0.92
Hdac1O09106 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac1O09106 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.8■□□□□ 0.92
Hdac1O09106 Gm13148-201ENSMUST00000118892 745 ntBASIC20.8■□□□□ 0.92
Hdac1O09106 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac1O09106 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac1O09106 Gm26571-201ENSMUST00000181399 666 ntBASIC20.8■□□□□ 0.92
Hdac1O09106 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac1O09106 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hdac1O09106 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hdac1O09106 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.79■□□□□ 0.92
Hdac1O09106 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hdac1O09106 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.79■□□□□ 0.92
Hdac1O09106 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.79■□□□□ 0.92
Hdac1O09106 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.79■□□□□ 0.92
Hdac1O09106 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hdac1O09106 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.78■□□□□ 0.92
Hdac1O09106 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac1O09106 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac1O09106 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.78■□□□□ 0.92
Hdac1O09106 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hdac1O09106 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac1O09106 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Hdac1O09106 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.78■□□□□ 0.92
Hdac1O09106 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac1O09106 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
Hdac1O09106 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Hdac1O09106 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac1O09106 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hdac1O09106 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac1O09106 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hdac1O09106 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac1O09106 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac1O09106 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac1O09106 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.77■□□□□ 0.92
Hdac1O09106 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac1O09106 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac1O09106 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.91
Hdac1O09106 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac1O09106 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac1O09106 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac1O09106 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.76■□□□□ 0.91
Hdac1O09106 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.76■□□□□ 0.91
Hdac1O09106 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.76■□□□□ 0.91
Hdac1O09106 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hdac1O09106 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Mtag2-201ENSMUST00000058665 714 ntBASIC20.76■□□□□ 0.91
Hdac1O09106 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Hdac1O09106 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hdac1O09106 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac1O09106 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.76■□□□□ 0.91
Hdac1O09106 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac1O09106 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac1O09106 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms