Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.88■□□□□ 0.45
Ercc2O08811 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Gm4974-201ENSMUST00000209974 875 ntBASIC17.88■□□□□ 0.45
Ercc2O08811 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ercc2O08811 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ercc2O08811 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.88■□□□□ 0.45
Ercc2O08811 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.88■□□□□ 0.45
Ercc2O08811 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ercc2O08811 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.87■□□□□ 0.45
Ercc2O08811 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ercc2O08811 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Ercc2O08811 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.87■□□□□ 0.45
Ercc2O08811 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.87■□□□□ 0.45
Ercc2O08811 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.87■□□□□ 0.45
Ercc2O08811 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ercc2O08811 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ercc2O08811 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ercc2O08811 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.86■□□□□ 0.45
Ercc2O08811 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ercc2O08811 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ercc2O08811 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.86■□□□□ 0.45
Ercc2O08811 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.86■□□□□ 0.45
Ercc2O08811 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ercc2O08811 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ercc2O08811 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ercc2O08811 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.85■□□□□ 0.45
Ercc2O08811 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Mir1199-201ENSMUST00000117015 119 ntBASIC17.85■□□□□ 0.45
Ercc2O08811 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Ercc2O08811 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.85■□□□□ 0.45
Ercc2O08811 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ercc2O08811 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Ercc2O08811 Gm10812-201ENSMUST00000099864 546 ntBASIC17.85■□□□□ 0.45
Ercc2O08811 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.85■□□□□ 0.45
Ercc2O08811 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ercc2O08811 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.85■□□□□ 0.45
Ercc2O08811 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.84■□□□□ 0.45
Ercc2O08811 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Ercc2O08811 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ercc2O08811 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.84■□□□□ 0.45
Ercc2O08811 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.84■□□□□ 0.45
Ercc2O08811 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.84■□□□□ 0.45
Ercc2O08811 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.84■□□□□ 0.45
Ercc2O08811 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.84■□□□□ 0.45
Ercc2O08811 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ercc2O08811 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc2O08811 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ercc2O08811 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms