Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm17535J3KMR8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Gm2274-201ENSMUST00000184539 609 ntBASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Gm7977-201ENSMUST00000193787 748 ntBASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm17535J3KMR8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Gm45058-201ENSMUST00000205810 766 ntBASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Gm18959-201ENSMUST00000208954 655 ntBASIC18.59■□□□□ 0.57
Gm17535J3KMR8 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gm17535J3KMR8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm17535J3KMR8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm17535J3KMR8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm17535J3KMR8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm17535J3KMR8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm17535J3KMR8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm17535J3KMR8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm17535J3KMR8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm17535J3KMR8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm17535J3KMR8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm17535J3KMR8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm17535J3KMR8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm17535J3KMR8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm17535J3KMR8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm17535J3KMR8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Gm7370-201ENSMUST00000219471 767 ntBASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm17535J3KMR8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms