Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx1-1G3UXB3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Psmb5-202ENSMUST00000227257 622 ntBASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx1-1G3UXB3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Gm24841-201ENSMUST00000158676 357 ntBASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nkx1-1G3UXB3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Gm15165-201ENSMUST00000118140 502 ntBASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Gm14494-201ENSMUST00000118786 435 ntBASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 AC160962.2-201ENSMUST00000224761 632 ntBASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx1-1G3UXB3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Gm22885-201ENSMUST00000157410 107 ntBASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx1-1G3UXB3 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Gm43037-201ENSMUST00000196808 250 ntBASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx1-1G3UXB3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms