Protein–RNA interactions for Protein: F6U8B9

Gm17555, Predicted gene, 17555, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17555F6U8B9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gm17555F6U8B9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm17555F6U8B9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm17555F6U8B9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm17555F6U8B9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm17555F6U8B9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm17555F6U8B9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm17555F6U8B9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Gm6365-201ENSMUST00000054711 744 ntBASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm17555F6U8B9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Gm10602-201ENSMUST00000098239 609 ntBASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm17555F6U8B9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gm17555F6U8B9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm17555F6U8B9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm17555F6U8B9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Gm12933-201ENSMUST00000120203 872 ntBASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm17555F6U8B9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm17555F6U8B9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms