Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc141E9Q8Q6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc141E9Q8Q6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc141E9Q8Q6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc141E9Q8Q6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Ccdc141E9Q8Q6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC26.32■■□□□ 1.8
Ccdc141E9Q8Q6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Ccdc141E9Q8Q6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ccdc141E9Q8Q6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc141E9Q8Q6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc141E9Q8Q6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc141E9Q8Q6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ccdc141E9Q8Q6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Gm18733-201ENSMUST00000173950 856 ntBASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Gm27000-201ENSMUST00000182943 842 ntBASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ccdc141E9Q8Q6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ccdc141E9Q8Q6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Golph3-205ENSMUST00000228671 2842 ntBASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ccdc141E9Q8Q6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
Ccdc141E9Q8Q6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.8
Ccdc141E9Q8Q6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.8
Ccdc141E9Q8Q6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC26.26■■□□□ 1.79
Ccdc141E9Q8Q6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc141E9Q8Q6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc141E9Q8Q6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC26.26■■□□□ 1.79
Ccdc141E9Q8Q6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC26.26■■□□□ 1.79
Ccdc141E9Q8Q6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ccdc141E9Q8Q6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Gm15372-201ENSMUST00000120729 834 ntBASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ccdc141E9Q8Q6 Gm11336-201ENSMUST00000118168 334 ntBASIC26.24■■□□□ 1.79
Ccdc141E9Q8Q6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc141E9Q8Q6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Ccdc141E9Q8Q6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc141E9Q8Q6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC26.24■■□□□ 1.79
Ccdc141E9Q8Q6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC26.24■■□□□ 1.79
Ccdc141E9Q8Q6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ccdc141E9Q8Q6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Gm10052-201ENSMUST00000168019 960 ntBASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Gm7729-201ENSMUST00000050143 801 ntBASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC26.23■■□□□ 1.79
Ccdc141E9Q8Q6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms