Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh17E9PXF0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh17E9PXF0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdh17E9PXF0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Gm38027-201ENSMUST00000192315 235 ntBASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Gm4974-201ENSMUST00000209974 875 ntBASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh17E9PXF0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh17E9PXF0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh17E9PXF0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms