Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt28A6BLY7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Krt28A6BLY7 Gm12895-201ENSMUST00000122214 226 ntBASIC19.37■□□□□ 0.69
Krt28A6BLY7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Krt28A6BLY7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.37■□□□□ 0.69
Krt28A6BLY7 Gm18195-201ENSMUST00000207604 706 ntBASIC19.37■□□□□ 0.69
Krt28A6BLY7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.37■□□□□ 0.69
Krt28A6BLY7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Krt28A6BLY7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt28A6BLY7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt28A6BLY7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt28A6BLY7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.36■□□□□ 0.69
Krt28A6BLY7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt28A6BLY7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Gm10052-201ENSMUST00000168019 960 ntBASIC19.34■□□□□ 0.69
Krt28A6BLY7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Gm7729-201ENSMUST00000050143 801 ntBASIC19.34■□□□□ 0.69
Krt28A6BLY7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt28A6BLY7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt28A6BLY7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Gm37935-201ENSMUST00000192012 982 ntBASIC19.33■□□□□ 0.68
Krt28A6BLY7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.33■□□□□ 0.68
Krt28A6BLY7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.32■□□□□ 0.68
Krt28A6BLY7 Tgds-204ENSMUST00000228543 1594 ntBASIC19.32■□□□□ 0.68
Krt28A6BLY7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 Gm18206-201ENSMUST00000207027 926 ntBASIC19.32■□□□□ 0.68
Krt28A6BLY7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Krt28A6BLY7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt28A6BLY7 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.31■□□□□ 0.68
Krt28A6BLY7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt28A6BLY7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt28A6BLY7 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.3■□□□□ 0.68
Krt28A6BLY7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms