Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ttc38A3KMP2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ttc38A3KMP2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ttc38A3KMP2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ttc38A3KMP2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ttc38A3KMP2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ttc38A3KMP2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Gm12382-201ENSMUST00000122005 922 ntBASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Gm43183-201ENSMUST00000200632 547 ntBASIC19.01■□□□□ 0.63
Ttc38A3KMP2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Ttc38A3KMP2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19■□□□□ 0.63
Ttc38A3KMP2 Gm20760-201ENSMUST00000179197 648 ntBASIC19■□□□□ 0.63
Ttc38A3KMP2 Gm10698-201ENSMUST00000182663 604 ntBASIC19■□□□□ 0.63
Ttc38A3KMP2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ttc38A3KMP2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ttc38A3KMP2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ttc38A3KMP2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ttc38A3KMP2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ttc38A3KMP2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms