Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn1aA2APX8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Scn1aA2APX8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn1aA2APX8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn1aA2APX8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn1aA2APX8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.35■□□□□ 0.53
Scn1aA2APX8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.35■□□□□ 0.53
Scn1aA2APX8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Scn1aA2APX8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn1aA2APX8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn1aA2APX8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn1aA2APX8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn1aA2APX8 Il3ra-202ENSMUST00000223589 738 ntBASIC18.34■□□□□ 0.53
Scn1aA2APX8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn1aA2APX8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn1aA2APX8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn1aA2APX8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Gm45058-201ENSMUST00000205810 766 ntBASIC18.33■□□□□ 0.53
Scn1aA2APX8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.33■□□□□ 0.53
Scn1aA2APX8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scn1aA2APX8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scn1aA2APX8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.33■□□□□ 0.52
Scn1aA2APX8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scn1aA2APX8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.33■□□□□ 0.52
Scn1aA2APX8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Scn1aA2APX8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.32■□□□□ 0.52
Scn1aA2APX8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn1aA2APX8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Gm16061-201ENSMUST00000122167 857 ntBASIC18.31■□□□□ 0.52
Scn1aA2APX8 Gm7977-201ENSMUST00000193787 748 ntBASIC18.31■□□□□ 0.52
Scn1aA2APX8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn1aA2APX8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Gm2274-201ENSMUST00000184539 609 ntBASIC18.3■□□□□ 0.52
Scn1aA2APX8 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.3■□□□□ 0.52
Scn1aA2APX8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn1aA2APX8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms