Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm13401-201ENSMUST00000117074 291 ntBASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9-4A0A0B4J1K2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm37292-201ENSMUST00000192062 758 ntBASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm43183-201ENSMUST00000200632 547 ntBASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm11643-201ENSMUST00000119578 864 ntBASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm6576-201ENSMUST00000169678 883 ntBASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm10812-201ENSMUST00000099864 546 ntBASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-4A0A0B4J1K2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.1□□□□□ -0.31
Trav9-4A0A0B4J1K2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms