Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm8495-201ENSMUST00000188740 694 ntBASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm6365-201ENSMUST00000054711 744 ntBASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm7290-201ENSMUST00000104990 617 ntBASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm12918-201ENSMUST00000120234 636 ntBASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm15710-201ENSMUST00000121821 636 ntBASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm5075-201ENSMUST00000196916 622 ntBASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ighv1-11A0A0A6YWI9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms