Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav18A0A075B656 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav18A0A075B656 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav18A0A075B656 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav18A0A075B656 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.33□□□□□ -0.11
Trav18A0A075B656 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav18A0A075B656 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav18A0A075B656 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.33□□□□□ -0.12
Trav18A0A075B656 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav18A0A075B656 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.33□□□□□ -0.12
Trav18A0A075B656 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav18A0A075B656 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav18A0A075B656 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav18A0A075B656 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.33□□□□□ -0.12
Trav18A0A075B656 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav18A0A075B656 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.32□□□□□ -0.12
Trav18A0A075B656 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Gm13148-201ENSMUST00000118892 745 ntBASIC14.32□□□□□ -0.12
Trav18A0A075B656 Gm26524-201ENSMUST00000192339 390 ntBASIC14.32□□□□□ -0.12
Trav18A0A075B656 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav18A0A075B656 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav18A0A075B656 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav18A0A075B656 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Flg-201ENSMUST00000050758 1488 ntBASIC14.3□□□□□ -0.12
Trav18A0A075B656 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav18A0A075B656 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav18A0A075B656 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms