Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6n-5A0A075B621 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Mir8112-201ENSMUST00000184382 131 ntBASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav6n-5A0A075B621 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav6n-5A0A075B621 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav6n-5A0A075B621 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-5A0A075B621 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-5A0A075B621 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-5A0A075B621 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav6n-5A0A075B621 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms