Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.04■□□□□ -0
Trav5-1A0A075B5Z7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Gm6433-201ENSMUST00000118634 875 ntBASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Mir8112-201ENSMUST00000184382 131 ntBASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav5-1A0A075B5Z7 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Gm43799-201ENSMUST00000201845 579 ntBASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav5-1A0A075B5Z7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5-1A0A075B5Z7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5-1A0A075B5Z7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5-1A0A075B5Z7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5-1A0A075B5Z7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5-1A0A075B5Z7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm13836-201ENSMUST00000121159 501 ntBASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav5-1A0A075B5Z7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 AC159205.6-201ENSMUST00000224935 887 ntBASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav5-1A0A075B5Z7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms