Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.87□□□□□ -1.79
Trem1Q9JKE2 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Gm7204-201ENSMUST00000062591 600 ntBASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trem1Q9JKE2 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Trem1Q9JKE2 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.87□□□□□ -1.79
Trem1Q9JKE2 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm11909-201ENSMUST00000121424 759 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm26045-201ENSMUST00000157862 97 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm17043-201ENSMUST00000164621 1283 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Mir7046-201ENSMUST00000183435 66 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm27492-201ENSMUST00000185194 187 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm29534-201ENSMUST00000187328 382 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm28654-201ENSMUST00000189801 379 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm19065-202ENSMUST00000203910 1165 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm44816-201ENSMUST00000206666 477 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm44865-201ENSMUST00000207240 531 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AC154576.1-201ENSMUST00000225864 563 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AC154657.1-201ENSMUST00000226394 775 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trem1Q9JKE2 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm23256-201ENSMUST00000102235 110 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm26140-201ENSMUST00000103807 110 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm12392-201ENSMUST00000118014 938 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm3835-201ENSMUST00000120752 403 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm5392-201ENSMUST00000122189 789 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm22908-201ENSMUST00000177620 110 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm27535-201ENSMUST00000183814 157 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm27409-201ENSMUST00000184727 80 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm37681-201ENSMUST00000193880 727 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm33973-201ENSMUST00000195148 534 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm8069-201ENSMUST00000197887 154 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm43345-201ENSMUST00000199484 269 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm9375-201ENSMUST00000208899 903 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm16419-201ENSMUST00000221057 625 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm23300-201ENSMUST00000082712 125 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Mir218-2-201ENSMUST00000083649 110 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 n-R5s168-201ENSMUST00000083948 104 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trem1Q9JKE2 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.85□□□□□ -1.79
Trem1Q9JKE2 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms