Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm39197-201ENSMUST00000212069 457 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 AC118733.1-201ENSMUST00000217387 1217 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm22971-201ENSMUST00000083305 97 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.93□□□□□ -1.78
Cdc40Q9DC48 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm23273-201ENSMUST00000104058 135 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm14621-201ENSMUST00000117709 689 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm11965-201ENSMUST00000122017 277 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm10444-201ENSMUST00000126708 148 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm24224-201ENSMUST00000158828 258 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm19807-201ENSMUST00000173971 667 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm15143-201ENSMUST00000178180 714 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Mir6537-201ENSMUST00000184150 110 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm38270-201ENSMUST00000192721 407 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm19908-201ENSMUST00000204684 391 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm19134-201ENSMUST00000221203 487 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdc40Q9DC48 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Mir551b-201ENSMUST00000102165 98 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm22269-201ENSMUST00000104002 130 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm14365-201ENSMUST00000117535 587 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm12465-201ENSMUST00000118591 300 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm14714-201ENSMUST00000119743 439 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm11483-201ENSMUST00000119839 247 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm8200-201ENSMUST00000122390 222 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm4487-201ENSMUST00000150617 442 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm23554-201ENSMUST00000157818 110 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm11394-201ENSMUST00000181421 517 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm28872-201ENSMUST00000191518 158 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm7449-201ENSMUST00000194393 663 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm4045-201ENSMUST00000204076 310 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm44521-201ENSMUST00000206469 217 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm6230-201ENSMUST00000208077 780 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdc40Q9DC48 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.91□□□□□ -1.78
Cdc40Q9DC48 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms