Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Smc1aQ9CU62 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm15148-201ENSMUST00000117602 156 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm11905-201ENSMUST00000117653 678 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm12571-201ENSMUST00000118132 243 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm5391-201ENSMUST00000121155 613 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm22378-201ENSMUST00000157481 111 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm22243-201ENSMUST00000178754 120 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm25942-201ENSMUST00000180080 110 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm37636-201ENSMUST00000193583 359 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm8069-201ENSMUST00000197887 154 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm19908-201ENSMUST00000204684 391 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm19885-201ENSMUST00000212853 343 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Smc1aQ9CU62 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.82□□□□□ -1.64
Smc1aQ9CU62 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm14656-201ENSMUST00000120342 502 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm13557-201ENSMUST00000120771 382 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm11506-201ENSMUST00000122414 470 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm25292-201ENSMUST00000122797 322 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm25553-201ENSMUST00000158076 79 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm22367-201ENSMUST00000178930 132 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm9775-201ENSMUST00000189402 331 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm4734-201ENSMUST00000200117 777 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm44773-201ENSMUST00000207374 557 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Smc1aQ9CU62 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm4596-201ENSMUST00000117197 442 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm24939-201ENSMUST00000158325 137 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm25839-201ENSMUST00000158921 103 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm16558-201ENSMUST00000163015 532 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm27165-201ENSMUST00000183951 232 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm19891-201ENSMUST00000189771 303 ntBASIC4.8□□□□□ -1.64
Smc1aQ9CU62 Gm37095-201ENSMUST00000195421 205 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms