Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm23746-201ENSMUST00000104229 125 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm16128-201ENSMUST00000117855 626 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm15766-201ENSMUST00000118025 813 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm8129-201ENSMUST00000118230 213 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm15077-201ENSMUST00000122344 362 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm3362-201ENSMUST00000148102 466 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm24751-201ENSMUST00000157844 102 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm26034-201ENSMUST00000158154 116 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm24734-201ENSMUST00000158860 262 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm28956-201ENSMUST00000189047 427 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm37946-201ENSMUST00000192064 347 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm43144-201ENSMUST00000198256 485 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm18327-201ENSMUST00000202426 830 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm21112-201ENSMUST00000212224 578 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm7760-201ENSMUST00000212265 578 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm7807-201ENSMUST00000212475 578 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm8158-201ENSMUST00000219220 465 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm8112-201ENSMUST00000219637 465 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 AC130823.2-201ENSMUST00000226169 290 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 AC125523.1-201ENSMUST00000228018 934 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Brf1Q8CFK2 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Mir669l-201ENSMUST00000103771 98 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm11909-201ENSMUST00000121424 759 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm23429-201ENSMUST00000122486 149 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm24875-201ENSMUST00000158888 104 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm23505-201ENSMUST00000158989 130 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm37219-201ENSMUST00000192036 926 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm36985-201ENSMUST00000195595 379 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm6719-201ENSMUST00000202067 335 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm29920-201ENSMUST00000206876 754 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 AC147101.1-201ENSMUST00000217964 312 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.62□□□□□ -1.51
Brf1Q8CFK2 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Brf1Q8CFK2 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm23709-201ENSMUST00000104364 130 ntBASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Brf1Q8CFK2 Gm12598-201ENSMUST00000117333 830 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms