Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm23123-201ENSMUST00000157648 144 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm24727-201ENSMUST00000158231 144 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm26460-201ENSMUST00000175061 126 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm8861-201ENSMUST00000196346 832 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm43424-201ENSMUST00000200484 253 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm4045-201ENSMUST00000204076 310 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Snora31-201ENSMUST00000083213 130 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Mir370-201ENSMUST00000083499 79 ntBASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ccdc28aQ8CEI3 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm15766-201ENSMUST00000118025 813 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm11866-201ENSMUST00000120209 335 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm12466-201ENSMUST00000121199 620 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm9003-201ENSMUST00000121810 482 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm7241-201ENSMUST00000159853 357 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm6650-201ENSMUST00000166710 614 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm18117-201ENSMUST00000187720 742 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm37836-201ENSMUST00000195875 175 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm6057-201ENSMUST00000195927 314 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm44845-201ENSMUST00000208773 335 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm19269-201ENSMUST00000211401 804 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm46327-201ENSMUST00000218240 365 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm46996-201ENSMUST00000220924 408 ntBASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc28aQ8CEI3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm11692-201ENSMUST00000122121 902 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm25965-201ENSMUST00000157170 93 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm25665-201ENSMUST00000157695 110 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Mir6903-201ENSMUST00000183597 88 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm27414-201ENSMUST00000185033 381 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm37878-201ENSMUST00000192108 387 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm18900-201ENSMUST00000193218 584 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm44604-201ENSMUST00000205475 496 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm5418-201ENSMUST00000206932 528 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm37672-201ENSMUST00000192682 4014 ntBASIC4.03□□□□□ -1.76
Ccdc28aQ8CEI3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
Ccdc28aQ8CEI3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc28aQ8CEI3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc28aQ8CEI3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc28aQ8CEI3 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc28aQ8CEI3 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc28aQ8CEI3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms