Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Atg4aQ8C9S8 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.94□□□□□ -1.62
Atg4aQ8C9S8 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.94□□□□□ -1.62
Atg4aQ8C9S8 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Atg4aQ8C9S8 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.94□□□□□ -1.62
Atg4aQ8C9S8 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Atg4aQ8C9S8 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm12001-201ENSMUST00000121727 913 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm11233-201ENSMUST00000122357 634 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm17155-201ENSMUST00000165969 473 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm27976-201ENSMUST00000183635 162 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm37300-201ENSMUST00000193327 280 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm8790-201ENSMUST00000194108 322 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm43308-201ENSMUST00000197236 373 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm44371-201ENSMUST00000204148 467 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm45690-201ENSMUST00000210775 246 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Atg4aQ8C9S8 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm13902-201ENSMUST00000120168 605 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm15075-201ENSMUST00000122187 477 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm23587-201ENSMUST00000157658 84 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm23554-201ENSMUST00000157818 110 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Mir6960-201ENSMUST00000183449 61 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm28304-201ENSMUST00000185977 312 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm29598-201ENSMUST00000188996 588 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm29256-201ENSMUST00000189094 312 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm28484-201ENSMUST00000190606 312 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm9238-201ENSMUST00000196181 329 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm43853-201ENSMUST00000197162 301 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm44431-201ENSMUST00000203500 413 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm8035-201ENSMUST00000204625 687 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Atg4aQ8C9S8 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Neat1-201ENSMUST00000173672 20771 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Gm23319-201ENSMUST00000104467 131 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Gm14885-201ENSMUST00000117969 496 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Gm12577-201ENSMUST00000119701 574 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Gm11797-201ENSMUST00000121336 754 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Gm14713-201ENSMUST00000122362 686 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.91□□□□□ -1.62
Atg4aQ8C9S8 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms