Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm13640-201ENSMUST00000118445 264 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm12807-201ENSMUST00000121546 962 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm3339-201ENSMUST00000163462 475 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm21638-201ENSMUST00000179473 836 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm27315-201ENSMUST00000183977 154 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm7142-201ENSMUST00000194232 586 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm5034-201ENSMUST00000199115 634 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm42824-201ENSMUST00000199361 247 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm44989-201ENSMUST00000204749 217 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm7495-201ENSMUST00000215099 426 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm44439-201ENSMUST00000203379 3592 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm42528-201ENSMUST00000200697 3418 ntBASIC6.56□□□□□ -1.36
Usp40Q8BWR4 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm22091-201ENSMUST00000116908 127 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm11905-201ENSMUST00000117653 678 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm14307-201ENSMUST00000118930 291 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm14297-201ENSMUST00000129110 291 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm15914-201ENSMUST00000161922 309 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm18828-202ENSMUST00000181035 310 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm28008-201ENSMUST00000184021 186 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm27286-201ENSMUST00000184934 179 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm7634-201ENSMUST00000185778 553 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm38075-201ENSMUST00000191979 920 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm45032-201ENSMUST00000205375 520 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 AC154426.1-201ENSMUST00000225614 1132 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 CT025548.1-201ENSMUST00000227459 257 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm37749-201ENSMUST00000193917 1899 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm45853-201ENSMUST00000212310 3171 ntBASIC6.55□□□□□ -1.36
Usp40Q8BWR4 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm43696-201ENSMUST00000199385 6071 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm22473-201ENSMUST00000104114 132 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm14304-201ENSMUST00000117272 446 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm16383-201ENSMUST00000118122 232 ntBASIC6.54□□□□□ -1.36
Usp40Q8BWR4 Gm9078-201ENSMUST00000119126 617 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms