Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm26034-201ENSMUST00000158154 116 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm3221-201ENSMUST00000164869 440 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm24969-201ENSMUST00000180331 79 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Mir7022-201ENSMUST00000183749 61 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm37288-201ENSMUST00000193963 334 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm44474-201ENSMUST00000196525 127 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm43828-201ENSMUST00000196890 639 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 AC153957.1-201ENSMUST00000215235 229 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm34005-201ENSMUST00000215834 282 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm18442-201ENSMUST00000220925 639 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Usp43Q8BUM9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Mir676-201ENSMUST00000102443 89 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm22498-201ENSMUST00000104497 86 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm12520-201ENSMUST00000117493 316 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm14906-201ENSMUST00000119265 390 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm14500-201ENSMUST00000121647 113 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm15905-201ENSMUST00000137042 298 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm5353-201ENSMUST00000139800 793 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm24507-201ENSMUST00000157683 134 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm26310-201ENSMUST00000157766 117 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm23855-201ENSMUST00000158377 135 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm22355-201ENSMUST00000175531 96 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm5473-201ENSMUST00000179326 642 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm27659-201ENSMUST00000183472 98 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm29668-201ENSMUST00000187802 315 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm28191-201ENSMUST00000189112 211 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm37961-201ENSMUST00000192729 299 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm43631-201ENSMUST00000202011 369 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm44054-201ENSMUST00000203814 372 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm44857-201ENSMUST00000208331 196 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm3338-201ENSMUST00000220982 269 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm5185-201ENSMUST00000080271 619 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm23628-201ENSMUST00000082464 173 ntBASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Usp43Q8BUM9 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms