Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm15168-201ENSMUST00000121057 316 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm22345-201ENSMUST00000122644 107 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm28924-201ENSMUST00000190012 241 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm43894-201ENSMUST00000203274 688 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm45031-201ENSMUST00000206800 288 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm45247-201ENSMUST00000210757 309 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ccdc40Q8BI79 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm26387-201ENSMUST00000104238 132 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm11843-201ENSMUST00000118984 425 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm14714-201ENSMUST00000119743 439 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm6062-201ENSMUST00000120462 631 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm5123-201ENSMUST00000121905 837 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm16373-201ENSMUST00000129517 303 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm5755-201ENSMUST00000152394 837 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm23385-201ENSMUST00000158592 295 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm22530-201ENSMUST00000158820 118 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm23702-201ENSMUST00000158840 130 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm20397-201ENSMUST00000174520 362 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm27025-201ENSMUST00000182392 942 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm4412-201ENSMUST00000186660 433 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm5368-201ENSMUST00000189012 589 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm29525-201ENSMUST00000189844 699 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm29523-201ENSMUST00000191415 699 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm38221-201ENSMUST00000195146 365 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm5885-202ENSMUST00000203357 528 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm4501-201ENSMUST00000207330 551 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm4558-201ENSMUST00000207886 521 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm4528-201ENSMUST00000207905 551 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm45651-201ENSMUST00000210857 335 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm25800-201ENSMUST00000082636 134 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm23875-201ENSMUST00000083711 318 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Gm44286-201ENSMUST00000204098 1487 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Synpr-207ENSMUST00000223583 3362 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.54□□□□□ -1.68
Ccdc40Q8BI79 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Mir105-201ENSMUST00000104655 80 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm12520-201ENSMUST00000117493 316 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm15206-201ENSMUST00000119143 454 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm13170-201ENSMUST00000119716 643 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm10059-201ENSMUST00000131139 171 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm12226-201ENSMUST00000144172 876 ntBASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.53□□□□□ -1.68
Ccdc40Q8BI79 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms