Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm24709-201ENSMUST00000104123 132 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm11270-201ENSMUST00000117685 471 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm12936-201ENSMUST00000121439 301 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm14784-201ENSMUST00000121604 663 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm11679-201ENSMUST00000121830 779 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm16566-201ENSMUST00000160387 910 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm43804-201ENSMUST00000198280 456 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm45367-201ENSMUST00000210171 347 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AC154296.2-201ENSMUST00000214696 545 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AC125020.2-201ENSMUST00000218894 348 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AC154576.1-201ENSMUST00000225864 563 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AC116656.1-201ENSMUST00000227040 755 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.6□□□□□ -1.51
Ccdc116Q80X53 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc116Q80X53 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm11561-201ENSMUST00000117429 417 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm11774-201ENSMUST00000118601 293 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm11902-201ENSMUST00000118849 270 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm12732-201ENSMUST00000121688 180 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm22208-201ENSMUST00000122658 110 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm22867-201ENSMUST00000157499 109 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Mir3066-201ENSMUST00000175296 83 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm29031-201ENSMUST00000185316 614 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm29000-201ENSMUST00000185444 614 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm28204-201ENSMUST00000185934 614 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm28290-201ENSMUST00000186505 614 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm28161-201ENSMUST00000186669 614 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm9569-201ENSMUST00000187492 787 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm28749-209ENSMUST00000189599 614 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm33163-201ENSMUST00000194504 614 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm44307-201ENSMUST00000204466 764 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 Gm44539-201ENSMUST00000206010 238 ntBASIC5.59□□□□□ -1.51
Ccdc116Q80X53 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms