Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir6344-201ENSMUST00000183462 104 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm34224-201ENSMUST00000204606 364 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 AC124542.1-201ENSMUST00000205588 908 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 AC167192.1-201ENSMUST00000225908 139 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 AV026068-237ENSMUST00000226075 572 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 AC117814.1-201ENSMUST00000226135 352 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm14445-201ENSMUST00000117051 1484 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ubfd1Q78JW9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm12393-201ENSMUST00000117084 848 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm13379-201ENSMUST00000118053 621 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm11843-201ENSMUST00000118984 425 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm15387-201ENSMUST00000120421 648 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm13865-201ENSMUST00000120957 865 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm14907-201ENSMUST00000121948 854 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm24371-201ENSMUST00000122662 267 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm23505-201ENSMUST00000158989 130 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm8161-201ENSMUST00000168739 481 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm25534-201ENSMUST00000175365 125 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm37337-201ENSMUST00000192601 993 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm37164-201ENSMUST00000192809 637 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm18382-201ENSMUST00000194394 582 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm44402-201ENSMUST00000203677 238 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm44634-201ENSMUST00000206119 152 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 AC153957.1-201ENSMUST00000215235 229 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm22826-201ENSMUST00000083774 165 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm5518-201ENSMUST00000084171 648 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ubfd1Q78JW9 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ubfd1Q78JW9 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms