Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Gm29479-201ENSMUST00000190352 455 ntBASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Gm37319-201ENSMUST00000193500 636 ntBASIC4.6□□□□□ -1.67
Herc4Q6PAV2 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Gm46138-201ENSMUST00000215294 426 ntBASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.6□□□□□ -1.67
Herc4Q6PAV2 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.6□□□□□ -1.67
Herc4Q6PAV2 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Herc4Q6PAV2 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Snord66-201ENSMUST00000104051 75 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm25726-201ENSMUST00000104529 129 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm11448-201ENSMUST00000120427 450 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm36985-201ENSMUST00000195595 379 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm36259-201ENSMUST00000197340 392 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm43925-201ENSMUST00000203498 206 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm8942-201ENSMUST00000217892 400 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Gm23928-201ENSMUST00000082469 145 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Mir504-201ENSMUST00000093602 79 ntBASIC4.59□□□□□ -1.67
Herc4Q6PAV2 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.59□□□□□ -1.67
Herc4Q6PAV2 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Herc4Q6PAV2 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Mir761-201ENSMUST00000103245 76 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm10552-201ENSMUST00000113396 372 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm13478-201ENSMUST00000118312 413 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm15212-201ENSMUST00000122403 466 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm25913-201ENSMUST00000157617 135 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Mir5106-201ENSMUST00000174936 73 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm29281-201ENSMUST00000188077 381 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Ighv8-1-201ENSMUST00000194897 291 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm43855-201ENSMUST00000197462 507 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm31532-201ENSMUST00000203555 767 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm44665-201ENSMUST00000205381 251 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm18377-201ENSMUST00000215141 607 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm18043-201ENSMUST00000216741 739 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm23875-201ENSMUST00000083711 318 ntBASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Herc4Q6PAV2 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.57□□□□□ -1.68
Herc4Q6PAV2 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Herc4Q6PAV2 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Herc4Q6PAV2 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.57□□□□□ -1.68
Herc4Q6PAV2 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Herc4Q6PAV2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Herc4Q6PAV2 Gm8666-201ENSMUST00000117517 292 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms