Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sp140Q6NSQ5 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sp140Q6NSQ5 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Mir467h-201ENSMUST00000116759 121 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm14082-201ENSMUST00000118582 801 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm11409-201ENSMUST00000118621 403 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm15012-201ENSMUST00000119176 106 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm14655-201ENSMUST00000120124 578 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Mir3080-201ENSMUST00000175010 79 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm23379-201ENSMUST00000180026 107 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Mir7008-201ENSMUST00000184398 63 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm29550-201ENSMUST00000185543 285 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm28560-201ENSMUST00000186091 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm28334-201ENSMUST00000186653 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm28495-201ENSMUST00000188452 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm28232-201ENSMUST00000188683 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm28481-201ENSMUST00000189231 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm29059-201ENSMUST00000191534 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm37765-201ENSMUST00000192395 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm37237-201ENSMUST00000192893 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm36998-201ENSMUST00000193205 704 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm36968-201ENSMUST00000193737 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm38290-201ENSMUST00000195238 315 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm9236-201ENSMUST00000196892 587 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Mir142-201ENSMUST00000198092 64 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm43315-201ENSMUST00000198120 313 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm32536-201ENSMUST00000205209 445 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 CT025526.1-201ENSMUST00000217327 267 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm18557-201ENSMUST00000218710 433 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm6056-201ENSMUST00000221253 488 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm5215-201ENSMUST00000054380 405 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sp140Q6NSQ5 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm14575-201ENSMUST00000117210 560 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm14046-201ENSMUST00000119389 509 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm11742-201ENSMUST00000119903 233 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm13751-201ENSMUST00000120280 752 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm11804-201ENSMUST00000121663 468 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm22343-201ENSMUST00000122648 286 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm16259-201ENSMUST00000145241 553 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm26349-201ENSMUST00000157530 130 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm23824-201ENSMUST00000158741 276 ntBASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sp140Q6NSQ5 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms