Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ccdc88bQ4QRL3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ccdc88bQ4QRL3 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.39□□□□□ -1.39
Ccdc88bQ4QRL3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm15994-201ENSMUST00000118029 402 ntBASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm15026-201ENSMUST00000119219 458 ntBASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm43315-201ENSMUST00000198120 313 ntBASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm44681-201ENSMUST00000208447 842 ntBASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Gm19196-201ENSMUST00000209258 357 ntBASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ccdc88bQ4QRL3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm22890-201ENSMUST00000158642 144 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm3470-201ENSMUST00000160819 420 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm20693-201ENSMUST00000177431 211 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm6075-201ENSMUST00000186816 486 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm29668-201ENSMUST00000187802 315 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm44611-201ENSMUST00000207507 355 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm6240-201ENSMUST00000208014 473 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm8231-201ENSMUST00000221617 783 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 AC115291.2-201ENSMUST00000228335 437 ntBASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc88bQ4QRL3 Gm28359-201ENSMUST00000187470 1322 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm15231-201ENSMUST00000119174 447 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm12577-201ENSMUST00000119701 574 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm14714-201ENSMUST00000119743 439 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm15022-201ENSMUST00000122074 746 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm20773-201ENSMUST00000178940 681 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm29563-201ENSMUST00000187249 496 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm8748-201ENSMUST00000211125 587 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 AC124581.4-201ENSMUST00000225874 463 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 AC119573.1-201ENSMUST00000227960 757 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Gm24244-201ENSMUST00000157317 130 ntBASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Gm32381-201ENSMUST00000203192 476 ntBASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.35□□□□□ -1.39
Ccdc88bQ4QRL3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm29334-201ENSMUST00000190334 357 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm36382-201ENSMUST00000198892 541 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm43217-201ENSMUST00000199513 367 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm19596-201ENSMUST00000203685 739 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm45080-201ENSMUST00000206648 283 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm36371-201ENSMUST00000209043 1103 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm19154-201ENSMUST00000223330 940 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Gm37204-201ENSMUST00000192389 3961 ntBASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc88bQ4QRL3 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Gm15613-201ENSMUST00000118396 326 ntBASIC6.34□□□□□ -1.4
Ccdc88bQ4QRL3 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.34□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 319.8 ms