Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm8641-201ENSMUST00000186995 826 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm29454-201ENSMUST00000190805 393 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm44300-201ENSMUST00000196792 121 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm4859-201ENSMUST00000199625 787 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm44332-201ENSMUST00000203712 433 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm18442-201ENSMUST00000220925 639 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 AC131743.3-201ENSMUST00000222099 662 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Mir337-201ENSMUST00000083592 97 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trim40Q3UWA4 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm44562-201ENSMUST00000207194 1347 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm22498-201ENSMUST00000104497 86 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm12285-201ENSMUST00000117347 233 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm12073-201ENSMUST00000117382 524 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm13743-201ENSMUST00000121486 724 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm23702-201ENSMUST00000158840 130 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm18406-201ENSMUST00000185872 669 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm37098-201ENSMUST00000192290 244 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm38214-201ENSMUST00000192581 988 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Trbv11-201ENSMUST00000194354 260 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm37993-201ENSMUST00000195301 988 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm17954-201ENSMUST00000195893 607 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm42926-201ENSMUST00000200496 697 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm44765-201ENSMUST00000206927 601 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm45392-201ENSMUST00000210441 214 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm22575-201ENSMUST00000082981 110 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.04□□□□□ -1.76
Trim40Q3UWA4 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm24067-201ENSMUST00000104514 85 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Mir1188-201ENSMUST00000116756 120 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm14878-201ENSMUST00000118167 293 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm14541-201ENSMUST00000118985 157 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm26254-201ENSMUST00000122491 118 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm5924-201ENSMUST00000132554 871 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm23499-201ENSMUST00000157736 268 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm4222-201ENSMUST00000165784 470 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm17177-201ENSMUST00000169144 483 ntBASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trim40Q3UWA4 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms