Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm11432-201ENSMUST00000117334 231 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm11692-201ENSMUST00000122121 902 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm7241-201ENSMUST00000159853 357 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm22398-201ENSMUST00000174941 125 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm25731-201ENSMUST00000175167 125 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Mir7658-201ENSMUST00000184043 57 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm28396-201ENSMUST00000190309 379 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm4644-201ENSMUST00000197587 400 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm43814-201ENSMUST00000197851 413 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm43424-201ENSMUST00000200484 253 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm8132-201ENSMUST00000204938 640 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm44543-201ENSMUST00000209136 396 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm9472-201ENSMUST00000221625 526 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.35□□□□□ -1.71
Upf3aQ3ULJ3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm24403-201ENSMUST00000104616 130 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm13268-201ENSMUST00000117485 433 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm14564-201ENSMUST00000122159 294 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm22059-201ENSMUST00000157544 104 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm23781-201ENSMUST00000157940 308 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm16290-201ENSMUST00000161175 474 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm3339-201ENSMUST00000163462 475 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm21991-201ENSMUST00000180006 508 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm28094-201ENSMUST00000185262 390 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm29556-201ENSMUST00000187591 696 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm8939-201ENSMUST00000192577 964 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm4036-201ENSMUST00000220842 626 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Mir323-201ENSMUST00000083683 86 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.34□□□□□ -1.71
Upf3aQ3ULJ3 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Upf3aQ3ULJ3 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Upf3aQ3ULJ3 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.34□□□□□ -1.72
Upf3aQ3ULJ3 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Upf3aQ3ULJ3 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upf3aQ3ULJ3 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms