Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Col9a1Q05722 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col9a1Q05722 Gm37499-201ENSMUST00000194683 3478 ntBASIC6.51□□□□□ -1.37
Col9a1Q05722 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm8402-201ENSMUST00000118183 1770 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm8383-201ENSMUST00000121179 1770 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Mir541-201ENSMUST00000102097 90 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm11561-201ENSMUST00000117429 417 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm14768-201ENSMUST00000122126 678 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm25383-201ENSMUST00000157810 144 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Mir1970-201ENSMUST00000157839 104 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm24191-201ENSMUST00000157977 122 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm22311-201ENSMUST00000158006 110 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm25223-201ENSMUST00000158200 110 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm25714-201ENSMUST00000158626 296 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm25071-201ENSMUST00000175232 70 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm27018-201ENSMUST00000181136 225 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Mir7062-201ENSMUST00000185038 66 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm29352-201ENSMUST00000188054 544 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm38670-201ENSMUST00000199248 77 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 AC154576.1-201ENSMUST00000225864 563 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm5229-201ENSMUST00000039375 354 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Mir375-201ENSMUST00000083682 64 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC6.5□□□□□ -1.37
Col9a1Q05722 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.5□□□□□ -1.37
Col9a1Q05722 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col9a1Q05722 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.49□□□□□ -1.37
Col9a1Q05722 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.49□□□□□ -1.37
Col9a1Q05722 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.49□□□□□ -1.37
Col9a1Q05722 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 Gm17969-201ENSMUST00000185706 2557 ntBASIC6.49□□□□□ -1.37
Col9a1Q05722 Gm43766-201ENSMUST00000200590 5417 ntBASIC6.49□□□□□ -1.37
Col9a1Q05722 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col9a1Q05722 Gm22592-201ENSMUST00000104242 131 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms