Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm5252-201ENSMUST00000189030 909 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Gm32295-201ENSMUST00000192558 696 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Gm31260-201ENSMUST00000193478 696 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Gm44952-201ENSMUST00000204443 433 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Gm45031-201ENSMUST00000206800 288 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.92□□□□□ -1.78
Sox6P40645 Gm18320-201ENSMUST00000211304 595 ntBASIC3.92□□□□□ -1.78
Sox6P40645 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.92□□□□□ -1.78
Sox6P40645 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Gm46327-201ENSMUST00000218240 365 ntBASIC3.92□□□□□ -1.78
Sox6P40645 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.92□□□□□ -1.78
Sox6P40645 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.92□□□□□ -1.78
Sox6P40645 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sox6P40645 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Sox6P40645 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Sox6P40645 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sox6P40645 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Sox6P40645 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.92□□□□□ -1.78
Sox6P40645 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sox6P40645 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Sox6P40645 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sox6P40645 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Gm24469-201ENSMUST00000104487 131 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sox6P40645 Gm14621-201ENSMUST00000117709 689 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm13743-201ENSMUST00000121486 724 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm12340-201ENSMUST00000121617 462 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm23467-201ENSMUST00000157127 159 ntBASIC3.91□□□□□ -1.78
Sox6P40645 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Sox6P40645 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Mir6986-201ENSMUST00000184483 58 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm20954-201ENSMUST00000189078 644 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Gm37878-201ENSMUST00000192108 387 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm37836-201ENSMUST00000195875 175 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm17954-201ENSMUST00000195893 607 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm43710-201ENSMUST00000199583 452 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm4859-201ENSMUST00000199625 787 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm8774-201ENSMUST00000203621 692 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm44002-201ENSMUST00000205134 594 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm45228-201ENSMUST00000206585 352 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm44773-201ENSMUST00000207374 557 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm45458-201ENSMUST00000209900 522 ntBASIC3.91□□□□□ -1.78
Sox6P40645 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC3.91□□□□□ -1.78
Sox6P40645 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 AC125190.2-201ENSMUST00000221160 497 ntBASIC3.91□□□□□ -1.78
Sox6P40645 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sox6P40645 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Sox6P40645 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Sox6P40645 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sox6P40645 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Sox6P40645 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Sox6P40645 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Sox6P40645 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.91□□□□□ -1.78
Sox6P40645 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
Sox6P40645 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Sox6P40645 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Sox6P40645 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Sox6P40645 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Sox6P40645 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Sox6P40645 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Sox6P40645 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Sox6P40645 Gm22778-201ENSMUST00000104090 128 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm13550-201ENSMUST00000118185 525 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm14750-201ENSMUST00000118262 516 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm14541-201ENSMUST00000118985 157 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm12852-201ENSMUST00000119478 719 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm15141-201ENSMUST00000121860 729 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm23465-201ENSMUST00000157134 262 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm16303-201ENSMUST00000161498 390 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Sox6P40645 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Sox6P40645 Gm29228-201ENSMUST00000185489 418 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Sox6P40645 Gm43774-201ENSMUST00000196327 878 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm43856-201ENSMUST00000197004 369 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm42566-201ENSMUST00000197120 643 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm43730-201ENSMUST00000199863 372 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm18100-201ENSMUST00000200897 452 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Gm44059-201ENSMUST00000204048 351 ntBASIC3.9□□□□□ -1.79
Sox6P40645 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.9□□□□□ -1.79
Sox6P40645 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.9□□□□□ -1.79
Sox6P40645 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms