Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22625-201ENSMUST00000175382 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm22875-201ENSMUST00000175449 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm25197-201ENSMUST00000175516 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm27857-201ENSMUST00000176930 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm26268-201ENSMUST00000177685 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm13249-201ENSMUST00000177803 345 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm23681-201ENSMUST00000178821 126 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm13144-201ENSMUST00000179385 345 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm29031-201ENSMUST00000185316 614 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm29000-201ENSMUST00000185444 614 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm28204-201ENSMUST00000185934 614 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm28290-201ENSMUST00000186505 614 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm28161-201ENSMUST00000186669 614 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm28749-209ENSMUST00000189599 614 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm28872-201ENSMUST00000191518 158 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm37050-201ENSMUST00000193464 466 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm33163-201ENSMUST00000194504 614 ntBASIC5.11□□□□□ -1.59
Traf1P39428 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Traf1P39428 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.11□□□□□ -1.59
Traf1P39428 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.11□□□□□ -1.59
Traf1P39428 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.11□□□□□ -1.59
Traf1P39428 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.11□□□□□ -1.59
Traf1P39428 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Traf1P39428 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Traf1P39428 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
Traf1P39428 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Traf1P39428 AC155921.1-201ENSMUST00000216568 3841 ntBASIC5.11□□□□□ -1.59
Traf1P39428 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Traf1P39428 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Traf1P39428 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Traf1P39428 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Traf1P39428 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Traf1P39428 Gm23481-201ENSMUST00000104173 131 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Traf1P39428 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Traf1P39428 Gm14163-201ENSMUST00000117342 217 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm11673-201ENSMUST00000117846 331 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm14753-201ENSMUST00000118503 246 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm15075-201ENSMUST00000122187 477 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Traf1P39428 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.1□□□□□ -1.59
Traf1P39428 Mir3104-201ENSMUST00000174911 63 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Mir1264-201ENSMUST00000175381 86 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Rab26os-201ENSMUST00000176215 477 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm6214-201ENSMUST00000178845 541 ntBASIC5.1□□□□□ -1.59
Traf1P39428 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Traf1P39428 Mir6414-201ENSMUST00000183685 82 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm27940-201ENSMUST00000184449 98 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm29479-201ENSMUST00000190352 455 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm9245-201ENSMUST00000200528 983 ntBASIC5.1□□□□□ -1.59
Traf1P39428 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm18306-201ENSMUST00000207338 569 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Traf1P39428 AC122465.3-201ENSMUST00000221644 355 ntBASIC5.1□□□□□ -1.59
Traf1P39428 AC091683.1-201ENSMUST00000222307 2446 ntBASIC5.1□□□□□ -1.59
Traf1P39428 CT030166.1-201ENSMUST00000222654 357 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Traf1P39428 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Traf1P39428 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.1□□□□□ -1.59
Traf1P39428 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.09□□□□□ -1.59
Traf1P39428 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 Gm36927-201ENSMUST00000192504 1841 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
Traf1P39428 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Traf1P39428 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 Gm15001-201ENSMUST00000117657 795 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm11890-201ENSMUST00000119585 417 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm15926-201ENSMUST00000120492 550 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm25047-201ENSMUST00000122667 104 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 Gm23743-201ENSMUST00000157389 274 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm16558-201ENSMUST00000163015 532 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Traf1P39428 Gm21070-201ENSMUST00000182425 985 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Mir3620-201ENSMUST00000184710 61 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm42454-201ENSMUST00000196805 1181 ntBASIC5.09□□□□□ -1.59
Traf1P39428 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.09□□□□□ -1.59
Traf1P39428 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Traf1P39428 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.09□□□□□ -1.59
Traf1P39428 Gm45189-201ENSMUST00000208567 363 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Gm45434-201ENSMUST00000210550 293 ntBASIC5.09□□□□□ -1.59
Traf1P39428 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5.09□□□□□ -1.59
Traf1P39428 Gm18043-201ENSMUST00000216741 739 ntBASIC5.09□□□□□ -1.59
Traf1P39428 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Traf1P39428 Gm19134-201ENSMUST00000221203 487 ntBASIC5.09□□□□□ -1.59
Traf1P39428 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms