Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LdlrP35951 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
LdlrP35951 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LdlrP35951 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
LdlrP35951 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LdlrP35951 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Mir92b-201ENSMUST00000102300 83 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
LdlrP35951 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm13803-201ENSMUST00000117547 489 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm12717-201ENSMUST00000118427 983 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm16274-201ENSMUST00000139251 592 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm26173-201ENSMUST00000158416 136 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm26404-201ENSMUST00000158498 109 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm7609-204ENSMUST00000161424 461 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm27905-201ENSMUST00000184005 207 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm27818-201ENSMUST00000184536 159 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Mir6926-201ENSMUST00000184562 68 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm42694-201ENSMUST00000196951 358 ntBASIC5.07□□□□□ -1.6
LdlrP35951 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm19457-201ENSMUST00000200995 448 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm18672-201ENSMUST00000208035 270 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm19196-201ENSMUST00000209258 357 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LdlrP35951 Gm23242-201ENSMUST00000083055 107 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm23097-201ENSMUST00000083448 105 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
LdlrP35951 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LdlrP35951 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LdlrP35951 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LdlrP35951 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.07□□□□□ -1.6
LdlrP35951 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LdlrP35951 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LdlrP35951 Gm11486-201ENSMUST00000107322 478 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm12268-201ENSMUST00000118398 442 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm15452-201ENSMUST00000119877 240 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm15803-201ENSMUST00000120118 394 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm12332-201ENSMUST00000121397 922 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm25176-201ENSMUST00000122640 125 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm25290-201ENSMUST00000122796 144 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.06□□□□□ -1.6
LdlrP35951 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.06□□□□□ -1.6
LdlrP35951 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LdlrP35951 Gm14651-201ENSMUST00000147192 442 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm5699-201ENSMUST00000152491 723 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Snora81-201ENSMUST00000157310 178 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm25667-201ENSMUST00000157701 275 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm24944-201ENSMUST00000158330 128 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm23824-201ENSMUST00000158741 276 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LdlrP35951 Gm6632-201ENSMUST00000168425 954 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm25534-201ENSMUST00000175365 125 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm21729-201ENSMUST00000180058 664 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm21853-201ENSMUST00000180071 664 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Mir6341-201ENSMUST00000183490 121 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm27528-201ENSMUST00000183544 205 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm29495-201ENSMUST00000189319 664 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm20811-201ENSMUST00000190500 553 ntBASIC5.06□□□□□ -1.6
LdlrP35951 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.06□□□□□ -1.6
LdlrP35951 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms