Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.72□□□□□ -1.65
Hoxc11P31313 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.72□□□□□ -1.65
Hoxc11P31313 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hoxc11P31313 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
Hoxc11P31313 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Hoxc11P31313 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm15125-201ENSMUST00000116185 800 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm14365-201ENSMUST00000117535 587 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm12328-201ENSMUST00000118611 197 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm13172-201ENSMUST00000118685 256 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm11252-201ENSMUST00000120572 939 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm15116-201ENSMUST00000122248 663 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm2389-201ENSMUST00000160487 189 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Mir6393-201ENSMUST00000183709 94 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm37533-201ENSMUST00000193848 545 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm44261-201ENSMUST00000203337 209 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxc11P31313 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 AC168880.1-201ENSMUST00000225113 707 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 AC167977.2-201ENSMUST00000225676 682 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm24254-201ENSMUST00000083702 104 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm21286-201ENSMUST00000098035 545 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Svet1-201ENSMUST00000209370 3940 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.71□□□□□ -1.66
Hoxc11P31313 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Hoxc11P31313 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxc11P31313 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm11914-201ENSMUST00000117094 507 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm14795-201ENSMUST00000118461 471 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm15012-201ENSMUST00000119176 106 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm15227-201ENSMUST00000121844 399 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm14903-201ENSMUST00000122435 537 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxc11P31313 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxc11P31313 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm25714-201ENSMUST00000158626 296 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm5263-201ENSMUST00000163646 601 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm16490-201ENSMUST00000165299 351 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Hoxc11P31313 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Mir7028-201ENSMUST00000185016 64 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm37438-201ENSMUST00000192813 393 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm9238-201ENSMUST00000196181 329 ntBASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.7□□□□□ -1.66
Hoxc11P31313 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms