Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 Gm6501-201ENSMUST00000187178 916 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.08□□□□□ -1.44
RaraP11416 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.08□□□□□ -1.44
RaraP11416 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.08□□□□□ -1.44
RaraP11416 Gm4083-201ENSMUST00000207158 451 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm7786-201ENSMUST00000210494 436 ntBASIC6.08□□□□□ -1.44
RaraP11416 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.08□□□□□ -1.44
RaraP11416 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.08□□□□□ -1.44
RaraP11416 AC134468.2-201ENSMUST00000222549 672 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
RaraP11416 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.08□□□□□ -1.44
RaraP11416 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.08□□□□□ -1.44
RaraP11416 AC117588.3-201ENSMUST00000228517 325 ntBASIC6.08□□□□□ -1.44
RaraP11416 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RaraP11416 Gm23623-201ENSMUST00000082461 107 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm26206-201ENSMUST00000082908 110 ntBASIC6.08□□□□□ -1.44
RaraP11416 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RaraP11416 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.08□□□□□ -1.44
RaraP11416 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.08□□□□□ -1.44
RaraP11416 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RaraP11416 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC6.08□□□□□ -1.44
RaraP11416 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RaraP11416 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.08□□□□□ -1.44
RaraP11416 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
RaraP11416 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
RaraP11416 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.07□□□□□ -1.44
RaraP11416 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Gm26300-201ENSMUST00000102282 94 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm14529-201ENSMUST00000117894 406 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm11862-201ENSMUST00000119678 659 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm24306-201ENSMUST00000180229 79 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.07□□□□□ -1.44
RaraP11416 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.07□□□□□ -1.44
RaraP11416 Mir6971-201ENSMUST00000183497 63 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.07□□□□□ -1.44
RaraP11416 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RaraP11416 Gm36984-201ENSMUST00000192770 235 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.07□□□□□ -1.44
RaraP11416 Gm45523-201ENSMUST00000210712 799 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.07□□□□□ -1.44
RaraP11416 AV026068-216ENSMUST00000223874 328 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm23096-201ENSMUST00000083447 107 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm6990-201ENSMUST00000086830 348 ntBASIC6.07□□□□□ -1.44
RaraP11416 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Gm42755-201ENSMUST00000198533 1493 ntBASIC6.07□□□□□ -1.44
RaraP11416 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.07□□□□□ -1.44
RaraP11416 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.07□□□□□ -1.44
RaraP11416 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RaraP11416 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.07□□□□□ -1.44
RaraP11416 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RaraP11416 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.07□□□□□ -1.44
RaraP11416 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.06□□□□□ -1.44
RaraP11416 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm37551-201ENSMUST00000195556 2861 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm25097-201ENSMUST00000104042 145 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm23839-201ENSMUST00000116957 109 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm14594-201ENSMUST00000118052 537 ntBASIC6.06□□□□□ -1.44
RaraP11416 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm11268-201ENSMUST00000118347 267 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm14590-201ENSMUST00000118934 537 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm6884-201ENSMUST00000119318 615 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RaraP11416 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RaraP11416 Gm22492-201ENSMUST00000157192 297 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm23233-201ENSMUST00000157301 137 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm24289-201ENSMUST00000157629 135 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm26410-201ENSMUST00000157670 261 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RaraP11416 Gm17538-201ENSMUST00000168236 327 ntBASIC6.06□□□□□ -1.44
RaraP11416 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RaraP11416 Gm25314-201ENSMUST00000178810 79 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms