Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm23385-201ENSMUST00000158592 295 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm16558-201ENSMUST00000163015 532 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm20428-201ENSMUST00000174365 283 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm5558-201ENSMUST00000178933 495 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm9687-201ENSMUST00000189312 602 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm36966-201ENSMUST00000192217 413 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm37636-201ENSMUST00000193583 359 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm4052-201ENSMUST00000220890 451 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm35558-202ENSMUST00000221819 499 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Cbx4O55187 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm6065-201ENSMUST00000081336 492 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm22220-201ENSMUST00000082671 149 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Gm6043-201ENSMUST00000099961 492 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Cbx4O55187 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.55□□□□□ -1.68
Cbx4O55187 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Cbx4O55187 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Cbx4O55187 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.54□□□□□ -1.68
Cbx4O55187 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Cbx4O55187 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cbx4O55187 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm12062-201ENSMUST00000117533 259 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm15166-201ENSMUST00000120790 385 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm14784-201ENSMUST00000121604 663 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm14905-201ENSMUST00000122351 639 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm24628-201ENSMUST00000122761 289 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm22794-201ENSMUST00000157228 306 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm22143-201ENSMUST00000157401 203 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm26312-201ENSMUST00000157769 165 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm25923-201ENSMUST00000158312 138 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm6650-201ENSMUST00000166710 614 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm16378-201ENSMUST00000179168 342 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm26933-201ENSMUST00000182320 827 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm29281-201ENSMUST00000188077 381 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm37837-201ENSMUST00000191743 604 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm43144-201ENSMUST00000198256 485 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm42666-201ENSMUST00000201954 152 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm43897-201ENSMUST00000204019 309 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm45965-201ENSMUST00000221192 1284 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Nsa2-203ENSMUST00000225410 974 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm25821-201ENSMUST00000093657 133 ntBASIC4.54□□□□□ -1.68
Cbx4O55187 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Cbx4O55187 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Cbx4O55187 Gm42534-201ENSMUST00000196063 1754 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms