Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 BC023105-201ENSMUST00000073997 1227 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Snora31-201ENSMUST00000083213 130 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Hmgb3O54879 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Hmgb3O54879 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.22□□□□□ -1.89
Hmgb3O54879 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Hmgb3O54879 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
Hmgb3O54879 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Hmgb3O54879 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm23697-201ENSMUST00000103897 110 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm8244-201ENSMUST00000121254 264 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm10444-201ENSMUST00000126708 148 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm23152-201ENSMUST00000175322 116 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm26238-201ENSMUST00000175538 117 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Hmgb3O54879 Mir7008-201ENSMUST00000184398 63 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm27952-201ENSMUST00000184748 105 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm21735-201ENSMUST00000190360 696 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm37501-201ENSMUST00000192830 691 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm2053-201ENSMUST00000195671 631 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm36259-201ENSMUST00000197340 392 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm44607-201ENSMUST00000205611 1090 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Gm2607-201ENSMUST00000212389 627 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Supt4b-201ENSMUST00000214434 351 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.21□□□□□ -1.9
Hmgb3O54879 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Hmgb3O54879 n-R5s173-201ENSMUST00000082620 119 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Mir30b-201ENSMUST00000083542 96 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Mir17-201ENSMUST00000083574 84 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Hmgb3O54879 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.21□□□□□ -1.9
Hmgb3O54879 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb3O54879 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm24788-201ENSMUST00000104283 156 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm24318-201ENSMUST00000104490 131 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm12112-201ENSMUST00000117772 231 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm11984-201ENSMUST00000118142 766 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm12807-201ENSMUST00000121546 962 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm13419-201ENSMUST00000121711 271 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm14559-201ENSMUST00000121745 496 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm25433-201ENSMUST00000158283 286 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm5263-201ENSMUST00000163646 601 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm6486-201ENSMUST00000166202 434 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm27899-201ENSMUST00000184715 64 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm29086-201ENSMUST00000186774 222 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm29085-201ENSMUST00000187108 225 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm23925-202ENSMUST00000188429 132 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm28997-201ENSMUST00000188759 429 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm29428-201ENSMUST00000190086 409 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm29454-201ENSMUST00000190805 393 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm8599-201ENSMUST00000193033 457 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm36638-201ENSMUST00000193295 400 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm9722-201ENSMUST00000194568 802 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm43476-201ENSMUST00000197873 405 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm18325-201ENSMUST00000203228 835 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm44032-201ENSMUST00000204841 166 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Gm33626-201ENSMUST00000206790 828 ntBASIC3.2□□□□□ -1.9
Hmgb3O54879 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms