Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm25966-201ENSMUST00000157169 117 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm25713-201ENSMUST00000158625 109 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm6650-201ENSMUST00000166710 614 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm27976-201ENSMUST00000183635 162 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Mir3620-201ENSMUST00000184710 61 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Mir6899-201ENSMUST00000184798 64 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm29281-201ENSMUST00000188077 381 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm3496-201ENSMUST00000188283 745 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm37996-201ENSMUST00000191859 367 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm38080-201ENSMUST00000194035 268 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cx3cl1O35188 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Mir34b-201ENSMUST00000083558 84 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.81□□□□□ -1.8
Cx3cl1O35188 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Cx3cl1O35188 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cx3cl1O35188 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cx3cl1O35188 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm23322-201ENSMUST00000104464 167 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm14172-201ENSMUST00000118255 644 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm12252-201ENSMUST00000119517 219 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm15926-201ENSMUST00000120492 550 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm15120-201ENSMUST00000120602 301 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm25104-201ENSMUST00000122476 163 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm23781-201ENSMUST00000157940 308 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm21070-201ENSMUST00000182425 985 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm43853-201ENSMUST00000197162 301 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm43604-201ENSMUST00000199799 705 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.8□□□□□ -1.8
Cx3cl1O35188 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm31931-201ENSMUST00000219666 222 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Cx3cl1O35188 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.8□□□□□ -1.8
Cx3cl1O35188 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cx3cl1O35188 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Mir551b-201ENSMUST00000102165 98 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm23424-201ENSMUST00000103889 110 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm15151-201ENSMUST00000117106 177 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm11673-201ENSMUST00000117846 331 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm14753-201ENSMUST00000118503 246 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm12885-201ENSMUST00000122246 328 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm6969-201ENSMUST00000140065 342 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm26028-201ENSMUST00000158660 294 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm28997-201ENSMUST00000188759 429 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm5368-201ENSMUST00000189012 589 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm28396-201ENSMUST00000190309 379 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm38008-201ENSMUST00000195333 518 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm4644-201ENSMUST00000197587 400 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm45727-201ENSMUST00000212886 572 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 Gm19181-201ENSMUST00000218891 940 ntBASIC3.79□□□□□ -1.8
Cx3cl1O35188 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cx3cl1O35188 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms