Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ercc2O08811 Mir105-201ENSMUST00000104655 80 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm11633-201ENSMUST00000118176 444 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm12328-201ENSMUST00000118611 197 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm15267-201ENSMUST00000120888 464 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm25665-201ENSMUST00000157695 110 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm18128-201ENSMUST00000172625 511 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm27896-201ENSMUST00000175162 317 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.52□□□□□ -1.69
Ercc2O08811 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm27883-201ENSMUST00000183941 102 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm28385-201ENSMUST00000185671 292 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm21617-201ENSMUST00000188297 691 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm3933-201ENSMUST00000195391 439 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm8209-201ENSMUST00000206386 553 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm17766-201ENSMUST00000209223 442 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.52□□□□□ -1.69
Ercc2O08811 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ercc2O08811 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ercc2O08811 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm23628-201ENSMUST00000082464 173 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Ercc2O08811 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.52□□□□□ -1.69
Ercc2O08811 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ercc2O08811 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Ercc2O08811 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Ercc2O08811 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ercc2O08811 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.51□□□□□ -1.69
Ercc2O08811 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm14931-201ENSMUST00000111079 253 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm14879-201ENSMUST00000117308 507 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm12261-201ENSMUST00000117499 645 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm15553-201ENSMUST00000118757 430 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm23465-201ENSMUST00000157134 262 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm25278-201ENSMUST00000157267 120 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm22536-201ENSMUST00000158171 134 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm21809-201ENSMUST00000178495 468 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm17412-201ENSMUST00000179261 468 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ercc2O08811 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm4842-201ENSMUST00000183237 835 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm29031-201ENSMUST00000185316 614 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm29000-201ENSMUST00000185444 614 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm28204-201ENSMUST00000185934 614 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm28290-201ENSMUST00000186505 614 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm28161-201ENSMUST00000186669 614 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm28116-201ENSMUST00000189064 387 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm28749-209ENSMUST00000189599 614 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC4.51□□□□□ -1.69
Ercc2O08811 Gm33163-201ENSMUST00000194504 614 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm36382-201ENSMUST00000198892 541 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Gm4734-201ENSMUST00000200117 777 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Ercc2O08811 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ercc2O08811 Mir202-201ENSMUST00000083568 72 ntBASIC4.51□□□□□ -1.69
Ercc2O08811 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Ercc2O08811 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc2O08811 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ercc2O08811 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ercc2O08811 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms