Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm8641-201ENSMUST00000186995 826 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Mir28a-201ENSMUST00000083560 86 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm11372-201ENSMUST00000117348 570 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm24730-201ENSMUST00000158228 117 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm20693-201ENSMUST00000177431 211 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm42926-201ENSMUST00000200496 697 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm43039-201ENSMUST00000202883 963 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm7587-201ENSMUST00000207618 1021 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Gm7380-201ENSMUST00000211599 466 ntBASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cpsf1Q9EPU4 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm42447-201ENSMUST00000200102 2903 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Spin2g-201ENSMUST00000178425 687 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm20997-201ENSMUST00000205148 231 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm10704-201ENSMUST00000098952 730 ntBASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cpsf1Q9EPU4 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm37211-201ENSMUST00000193392 3433 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm12931-201ENSMUST00000117046 324 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm10241-201ENSMUST00000117664 286 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm13690-201ENSMUST00000118989 285 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm15926-201ENSMUST00000120492 550 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm25572-201ENSMUST00000157527 172 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm23084-201ENSMUST00000157850 114 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm26746-201ENSMUST00000181722 487 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm38098-201ENSMUST00000194115 241 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm45226-201ENSMUST00000206602 288 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.37□□□□□ -1.55
Cpsf1Q9EPU4 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Gm24608-201ENSMUST00000104381 136 ntBASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Gm8757-201ENSMUST00000119660 372 ntBASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cpsf1Q9EPU4 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms