Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm25748-201ENSMUST00000175487 70 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Mir713-201ENSMUST00000178651 108 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm23816-201ENSMUST00000179617 132 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm8282-201ENSMUST00000187559 483 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm28267-201ENSMUST00000191093 265 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm8939-201ENSMUST00000192577 964 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm35702-201ENSMUST00000198653 511 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm8820-201ENSMUST00000204077 571 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm39197-201ENSMUST00000212069 457 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm8724-201ENSMUST00000081668 483 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccdc3Q9D6Y1 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm24281-201ENSMUST00000104234 136 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm8666-201ENSMUST00000117517 292 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm15785-201ENSMUST00000119145 694 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm15141-201ENSMUST00000121860 729 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm23782-201ENSMUST00000157939 120 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm28871-201ENSMUST00000186191 687 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm29634-201ENSMUST00000188467 696 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm28699-201ENSMUST00000189193 696 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm4248-201ENSMUST00000196905 316 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm44946-201ENSMUST00000208425 572 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Mir504-201ENSMUST00000093602 79 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ccdc3Q9D6Y1 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm26019-201ENSMUST00000104407 119 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm11406-201ENSMUST00000117418 484 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm14539-201ENSMUST00000117527 174 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm12103-201ENSMUST00000121892 362 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Mir1251-201ENSMUST00000175486 84 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm10292-201ENSMUST00000183142 581 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Mir6996-201ENSMUST00000183922 61 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm29552-201ENSMUST00000190548 660 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm43730-201ENSMUST00000199863 372 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Gm46138-201ENSMUST00000215294 426 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.01□□□□□ -1.77
Ccdc3Q9D6Y1 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms