Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm25665-201ENSMUST00000157695 110 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm23387-201ENSMUST00000158586 107 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm25944-201ENSMUST00000178758 94 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm16378-201ENSMUST00000179168 342 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm22252-201ENSMUST00000179316 79 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm4557-201ENSMUST00000185826 907 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm4526-201ENSMUST00000186039 920 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm8708-201ENSMUST00000188500 906 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm28116-201ENSMUST00000189064 387 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm44757-201ENSMUST00000206373 157 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm45690-201ENSMUST00000210775 246 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm6988-201ENSMUST00000222676 375 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Mir350-201ENSMUST00000083639 99 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.72□□□□□ -1.65
Vps28Q9D1C8 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.71□□□□□ -1.65
Vps28Q9D1C8 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.71□□□□□ -1.65
Vps28Q9D1C8 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Vps28Q9D1C8 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm23709-201ENSMUST00000104364 130 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm15752-201ENSMUST00000117427 394 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm13932-201ENSMUST00000120873 610 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm26373-201ENSMUST00000157833 103 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm26085-201ENSMUST00000157900 116 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm22312-201ENSMUST00000158005 130 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm43276-201ENSMUST00000199712 364 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm29793-201ENSMUST00000202874 460 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm2522-201ENSMUST00000204280 322 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm45200-201ENSMUST00000207434 919 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm18442-201ENSMUST00000220925 639 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm19335-201ENSMUST00000195836 2069 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.71□□□□□ -1.66
Vps28Q9D1C8 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm25097-201ENSMUST00000104042 145 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm22498-201ENSMUST00000104497 86 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm12760-201ENSMUST00000117861 482 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm23499-201ENSMUST00000157736 268 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm24689-201ENSMUST00000157760 104 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm17038-201ENSMUST00000166586 494 ntBASIC4.7□□□□□ -1.66
Vps28Q9D1C8 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms