Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ddx56Q9D0R4 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm25758-201ENSMUST00000103987 129 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm14385-201ENSMUST00000116315 876 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm12102-201ENSMUST00000118251 604 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm12901-201ENSMUST00000118690 532 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm14103-201ENSMUST00000119075 366 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm22106-201ENSMUST00000122544 127 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm11507-201ENSMUST00000156462 412 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm22326-201ENSMUST00000158897 351 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm27528-201ENSMUST00000183544 205 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm3454-201ENSMUST00000185571 412 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm5731-201ENSMUST00000190969 481 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm37682-201ENSMUST00000191776 522 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm20162-201ENSMUST00000193629 871 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm19418-201ENSMUST00000197436 580 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm9386-201ENSMUST00000095195 381 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm42721-201ENSMUST00000197165 1523 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Ddx56Q9D0R4 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm11406-201ENSMUST00000117418 484 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm6969-201ENSMUST00000140065 342 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm14651-201ENSMUST00000147192 442 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm23965-201ENSMUST00000157969 142 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm26169-201ENSMUST00000158420 135 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Mir6400-201ENSMUST00000184870 92 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm2147-201ENSMUST00000193588 639 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm3010-201ENSMUST00000198805 448 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm29793-201ENSMUST00000202874 460 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm43925-201ENSMUST00000203498 206 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm44135-201ENSMUST00000205221 368 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm7786-201ENSMUST00000210494 436 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm3800-201ENSMUST00000221086 554 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ddx56Q9D0R4 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms