Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm12719-201ENSMUST00000118859 241 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm7219-201ENSMUST00000119619 297 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm6079-201ENSMUST00000121356 404 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm12340-201ENSMUST00000121617 462 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm22600-201ENSMUST00000157598 269 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm28639-201ENSMUST00000191519 481 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm36985-201ENSMUST00000195595 379 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm7786-201ENSMUST00000210494 436 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Cstf1Q99LC2 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm11877-201ENSMUST00000118921 852 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm25150-201ENSMUST00000157121 60 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm23865-201ENSMUST00000157723 97 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm6214-201ENSMUST00000178845 541 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Mir7062-201ENSMUST00000185038 66 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm8023-201ENSMUST00000195298 903 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm43853-201ENSMUST00000197162 301 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm9245-201ENSMUST00000200528 983 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm7468-201ENSMUST00000203900 652 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm45498-201ENSMUST00000210346 283 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm6177-201ENSMUST00000085589 465 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Svet1-201ENSMUST00000209370 3940 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cstf1Q99LC2 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm24281-201ENSMUST00000104234 136 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm12173-201ENSMUST00000117622 273 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm12335-201ENSMUST00000119738 327 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm26036-201ENSMUST00000158149 144 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm23860-201ENSMUST00000179446 132 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm5974-201ENSMUST00000181607 986 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm6230-201ENSMUST00000208077 780 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm45269-201ENSMUST00000210359 282 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cstf1Q99LC2 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms