Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm43992-201ENSMUST00000204358 197 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm18007-201ENSMUST00000205019 844 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm17989-201ENSMUST00000211543 412 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Gm45857-201ENSMUST00000212207 356 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm23594-201ENSMUST00000104307 134 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm12186-201ENSMUST00000119050 945 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm12237-201ENSMUST00000120158 470 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm14301-201ENSMUST00000120181 324 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm12486-201ENSMUST00000120887 541 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm23781-201ENSMUST00000157940 308 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm24773-201ENSMUST00000158513 99 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Mir3060-201ENSMUST00000175339 83 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm28917-201ENSMUST00000187294 237 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm28766-201ENSMUST00000191086 234 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm29138-201ENSMUST00000191444 348 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm38334-201ENSMUST00000195060 313 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm42999-201ENSMUST00000198049 786 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm45007-201ENSMUST00000206237 366 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm45735-201ENSMUST00000212779 319 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm5358-201ENSMUST00000212814 353 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm6474-201ENSMUST00000223250 699 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm23407-201ENSMUST00000082538 91 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Snora31-201ENSMUST00000083213 130 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc28bQ8CEG5 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm8569-201ENSMUST00000117630 647 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm14621-201ENSMUST00000117709 689 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm13537-201ENSMUST00000120467 267 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm15141-201ENSMUST00000121860 729 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm38201-201ENSMUST00000192143 387 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm18611-201ENSMUST00000200334 1118 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm32308-201ENSMUST00000203053 280 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm44088-201ENSMUST00000204595 237 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm44765-201ENSMUST00000206927 601 ntBASIC4.24□□□□□ -1.73
Ccdc28bQ8CEG5 Gm6230-201ENSMUST00000208077 780 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms