Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm28628-201ENSMUST00000187006 264 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm43096-201ENSMUST00000196173 421 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm44050-201ENSMUST00000204263 527 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm45209-201ENSMUST00000207122 353 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm8911-201ENSMUST00000213986 652 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC6.59□□□□□ -1.35
Usp40Q8BWR4 AC115750.1-201ENSMUST00000220441 567 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm3565-201ENSMUST00000222670 609 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm23300-201ENSMUST00000082712 125 ntBASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Usp40Q8BWR4 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Usp40Q8BWR4 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Usp40Q8BWR4 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm15752-201ENSMUST00000117427 394 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm14628-201ENSMUST00000117508 635 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Defa-ps15-201ENSMUST00000118178 477 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm14082-201ENSMUST00000118582 801 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm13815-201ENSMUST00000119963 412 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm23465-201ENSMUST00000157134 262 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm23501-201ENSMUST00000157744 256 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm23082-201ENSMUST00000157852 133 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm17152-201ENSMUST00000172430 535 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm25284-201ENSMUST00000180345 141 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm11392-201ENSMUST00000181419 710 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm18406-201ENSMUST00000185872 669 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm29356-201ENSMUST00000186935 373 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm19694-201ENSMUST00000192364 505 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm42594-201ENSMUST00000199511 246 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm43493-201ENSMUST00000199837 202 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm18258-201ENSMUST00000210413 542 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 AC167977.1-201ENSMUST00000221384 234 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 AC158521.1-201ENSMUST00000225295 660 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Mecom-201ENSMUST00000061088 348 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm26064-201ENSMUST00000083381 109 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm5746-201ENSMUST00000183550 2200 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.58□□□□□ -1.36
Usp40Q8BWR4 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm37115-201ENSMUST00000193750 2849 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm23942-201ENSMUST00000101956 107 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm11914-201ENSMUST00000117094 507 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm11631-201ENSMUST00000119220 156 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm23212-201ENSMUST00000122718 60 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm23034-201ENSMUST00000158001 147 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm25553-201ENSMUST00000158076 79 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm15796-201ENSMUST00000162135 204 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm28956-201ENSMUST00000189047 427 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm38149-201ENSMUST00000191943 339 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 AC091260.1-201ENSMUST00000216112 229 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 AC158633.1-201ENSMUST00000219892 649 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 AC116589.1-201ENSMUST00000220634 327 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 AC131068.1-201ENSMUST00000226891 482 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm7984-201ENSMUST00000060640 538 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm6195-201ENSMUST00000063059 357 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm23104-201ENSMUST00000083722 104 ntBASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Usp40Q8BWR4 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms