Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx55Q6ZPL9 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.54□□□□□ -1.52
Ddx55Q6ZPL9 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.54□□□□□ -1.52
Ddx55Q6ZPL9 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Ddx55Q6ZPL9 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx55Q6ZPL9 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx55Q6ZPL9 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm12225-201ENSMUST00000117995 298 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm16106-201ENSMUST00000119187 294 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm14906-201ENSMUST00000119265 390 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm22478-201ENSMUST00000122570 154 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm24751-201ENSMUST00000157844 102 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm26404-201ENSMUST00000158498 109 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm26362-201ENSMUST00000158865 315 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm37837-201ENSMUST00000191743 604 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm43489-201ENSMUST00000196810 993 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm9023-201ENSMUST00000198408 1038 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm45081-201ENSMUST00000206281 572 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm8911-201ENSMUST00000213986 652 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx55Q6ZPL9 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm13755-201ENSMUST00000118509 305 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm12852-201ENSMUST00000119478 719 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm16458-201ENSMUST00000121428 502 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm13459-201ENSMUST00000121558 646 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm25861-201ENSMUST00000158251 109 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm21809-201ENSMUST00000178495 468 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm17412-201ENSMUST00000179261 468 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm27805-201ENSMUST00000184513 79 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm19761-201ENSMUST00000205372 391 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm29920-201ENSMUST00000206876 754 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm7587-201ENSMUST00000207618 1021 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm44852-201ENSMUST00000207950 369 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm7119-201ENSMUST00000221345 695 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.52□□□□□ -1.53
Ddx55Q6ZPL9 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms